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DGKI diacylglycerol kinase iota [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102943678, updated on 18-Sep-2024

Summary

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Gene symbol
DGKI
Gene description
diacylglycerol kinase iota
Locus tag
UY3_18961
See related
EnsemblRapid:ENSCMYG00015020166
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See DGKI in Genome Data Viewer
Location:
chromosome: 1
Exon count:
36
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (244619041..244903232, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (244619067..244903146, complement)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor muscarinic 2 Neighboring gene uncharacterized LOC122464727 Neighboring gene pleiotrophin Neighboring gene uncharacterized LOC122464735 Neighboring gene uncharacterized LOC119563782 Neighboring gene cAMP responsive element binding protein 3 like 2 Neighboring gene single stranded DNA binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP-dependent diacylglycerol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in diacylglycerol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of synaptic transmission, glutamatergic IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
diacylglycerol kinase iota

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    244619041..244903232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037878871.2 → XP_037734799.1  diacylglycerol kinase iota isoform X2

    Related
    ENSCMYP00015031369.1, ENSCMYT00015038734.1
    Conserved Domains (6) summary
    smart00045
    Location:457 → 614
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:309 → 430
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    sd00045
    Location:882 → 915
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:854 → 949
    Ank_2; Ankyrin repeats (3 copies)
    cd20850
    Location:100 → 172
    C1_DGKiota_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase iota (DAG kinase iota) and similar proteins
    cd20896
    Location:181 → 255
    C1_DGKiota_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase iota (DAG kinase iota) and similar proteins

  2. XM_037878878.2 → XP_037734806.1  diacylglycerol kinase iota isoform X3

    Conserved Domains (6) summary
    smart00045
    Location:452 → 609
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:304 → 425
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    sd00045
    Location:877 → 910
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:849 → 944
    Ank_2; Ankyrin repeats (3 copies)
    cd20850
    Location:100 → 172
    C1_DGKiota_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase iota (DAG kinase iota) and similar proteins
    cd20896
    Location:181 → 255
    C1_DGKiota_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase iota (DAG kinase iota) and similar proteins

  3. XM_037878861.2 → XP_037734789.1  diacylglycerol kinase iota isoform X1

    Conserved Domains (6) summary
    smart00045
    Location:489 → 646
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:341 → 462
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    sd00045
    Location:914 → 947
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:886 → 981
    Ank_2; Ankyrin repeats (3 copies)
    cd20850
    Location:100 → 172
    C1_DGKiota_rpt1; first protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase iota (DAG kinase iota) and similar proteins
    cd20896
    Location:181 → 255
    C1_DGKiota_rpt2; second protein kinase C conserved region 1 (C1 domain) found in diacylglycerol kinase iota (DAG kinase iota) and similar proteins

  4. XM_043541178.1 → XP_043397113.1  diacylglycerol kinase iota isoform X5

    Conserved Domains (4) summary
    smart00045
    Location:336 → 493
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:188 → 309
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    COG0666
    Location:762 → 865
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:761 → 794
    ANK; ANK repeat [structural motif]

  5. XM_043541185.1 → XP_043397120.1  diacylglycerol kinase iota isoform X5

    Conserved Domains (4) summary
    smart00045
    Location:336 → 493
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:188 → 309
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
    COG0666
    Location:762 → 865
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:761 → 794
    ANK; ANK repeat [structural motif]

  6. XM_043541175.1 → XP_043397110.1  diacylglycerol kinase iota isoform X4

    Conserved Domains (2) summary
    smart00045
    Location:489 → 646
    DAGKa; Diacylglycerol kinase accessory domain (presumed)
    smart00046
    Location:341 → 462
    DAGKc; Diacylglycerol kinase catalytic domain (presumed)
Nucleotide Protein
Heading Accession and Version

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