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SLC27A5 solute carrier family 27 member 5 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102943144, updated on 11-Apr-2024

Summary

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Gene symbol
SLC27A5
Gene description
solute carrier family 27 member 5
Locus tag
UY3_14229
See related
EnsemblRapid:ENSCMYG00015012546
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See SLC27A5 in Genome Data Viewer
Location:
chromosome: 23
Exon count:
10
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 23 NC_051263.2 (14005789..14035931)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 23 Unlocalized Scaffold NW_023618337.1 (3613709..3643863)

Chromosome 23 - NC_051263.2Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 45 Neighboring gene uncharacterized LOC122463616 Neighboring gene uncharacterized LOC122463702 Neighboring gene matrix metalloproteinase-9-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables long-chain fatty acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables long-chain fatty acid-CoA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bile acyl-CoA synthetase
Names
Very long-chain acyl-CoA synthetase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051263.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    14005789..14035931
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043534446.1 → XP_043390381.1  bile acyl-CoA synthetase isoform X2

    Conserved Domains (1) summary
    cl17068
    Location:74 → 519
    AFD_class_I; Adenylate forming domain, Class I superfamily

  2. XM_027829569.3 → XP_027685370.2  bile acyl-CoA synthetase isoform X1

    Related
    ENSCMYP00015019445.1, ENSCMYT00015023592.1
    Conserved Domains (1) summary
    cl17068
    Location:74 → 610
    AFD_class_I; Adenylate forming domain, Class I superfamily
Nucleotide Protein
Heading Accession and Version

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