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ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102942769, updated on 10-Mar-2024

Summary

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Gene symbol
ST3GAL1
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 1
Locus tag
UY3_14069
See related
EnsemblRapid:ENSCMYG00015021172
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See ST3GAL1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (15582643..15701715)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (15582105..15701715)

Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122464209 Neighboring gene U5 spliceosomal RNA Neighboring gene uncharacterized LOC122464388 Neighboring gene uncharacterized LOC122464210 Neighboring gene N-myc downstream regulated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    15582643..15701715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037891978.2 → XP_037747906.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

    UniProtKB/TrEMBL
    M7AVV1
    Related
    ENSCMYP00015032153.1, ENSCMYT00015039783.1
    Conserved Domains (1) summary
    pfam00777
    Location:82 → 337
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_043539059.1 → XP_043394994.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

    UniProtKB/TrEMBL
    M7AVV1
    Conserved Domains (1) summary
    pfam00777
    Location:82 → 337
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_043539060.1 → XP_043394995.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1

    UniProtKB/TrEMBL
    M7AVV1
    Conserved Domains (1) summary
    pfam00777
    Location:82 → 337
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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