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PLEKHA2 pleckstrin homology domain containing A2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102942650, updated on 10-Mar-2024

Summary

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Gene symbol
PLEKHA2
Gene description
pleckstrin homology domain containing A2
Locus tag
UY3_01011
See related
EnsemblRapid:ENSCMYG00015009067
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See PLEKHA2 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
13
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 26 NC_057859.1 (1423314..1477744, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 26 NC_051266.1 (1426367..1477428, complement)

Chromosome 26 - NC_057859.1Genomic Context describing neighboring genes Neighboring gene TM2 domain containing 2 Neighboring gene HtrA serine peptidase 4 Neighboring gene transforming acidic coiled-coil containing protein 1 Neighboring gene uncharacterized LOC119564492

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables PDZ domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pleckstrin homology domain-containing family A member 2
Names
Pleckstrin like proteiny domain-containing family A member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057859.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    1423314..1477744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037886336.2 → XP_037742264.1  pleckstrin homology domain-containing family A member 2 isoform X1

    UniProtKB/TrEMBL
    M7C0P5
    Related
    ENSCMYP00015013999.1, ENSCMYT00015016947.1
    Conserved Domains (2) summary
    cd13270
    Location:1 → 119
    PH1_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, N-terminal repeat
    cd13271
    Location:194 → 308
    PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat

  2. XM_037886338.2 → XP_037742266.1  pleckstrin homology domain-containing family A member 2 isoform X3

    Conserved Domains (2) summary
    cd13271
    Location:145 → 259
    PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
    cl17171
    Location:1 → 115
    PH-like; Pleckstrin homology-like domain

  3. XM_037886337.2 → XP_037742265.1  pleckstrin homology domain-containing family A member 2 isoform X2

    Related
    ENSCMYP00015013993.1, ENSCMYT00015016941.1
    Conserved Domains (2) summary
    cd13271
    Location:153 → 267
    PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
    cl17171
    Location:7 → 78
    PH-like; Pleckstrin homology-like domain

  4. XM_037886339.2 → XP_037742267.1  pleckstrin homology domain-containing family A member 2 isoform X4

    Conserved Domains (2) summary
    cd13271
    Location:133 → 247
    PH2_TAPP1_2; Tandem PH-domain-containing proteins 1 and 2 Pleckstrin homology (PH) domain, C-terminal repeat
    cl17171
    Location:22 → 58
    PH-like; Pleckstrin homology-like domain
Nucleotide Protein
Heading Accession and Version

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