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LOC102941601 alpha-1,3-galactosyltransferase 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102941601, updated on 6-Feb-2024

Summary

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Gene symbol
LOC102941601
Gene description
alpha-1,3-galactosyltransferase 2
Locus tag
UY3_18077
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Also known as
A3GALT2
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Genomic context

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See LOC102941601 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
3
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 18 NC_051258.2 (2256833..2290707, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 18 NC_051258.1 (21129023..21129702)

Chromosome 18 - NC_051258.2Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 62 Neighboring gene zinc finger protein 362 Neighboring gene polyhomeotic homolog 2 Neighboring gene 40S ribosomal protein S2-like Neighboring gene 28S ribosomal protein S24-A, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: alpha-1,3-galactosyltransferase 2
Names
N-acetyllactosaminide alpha-1,3-galactosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051258.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    2256833..2290707 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027833537.3 → XP_027689338.3  LOW QUALITY PROTEIN: alpha-1,3-galactosyltransferase 2

    Conserved Domains (1) summary
    cl11394
    Location:120 → 344
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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