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KIRREL1 kirre like nephrin family adhesion molecule 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102941508, updated on 10-Mar-2024

Summary

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Gene symbol
KIRREL1
Gene description
kirre like nephrin family adhesion molecule 1
Locus tag
UY3_11574
See related
EnsemblRapid:ENSCMYG00015004852
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See KIRREL1 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
15
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 24 NC_051264.2 (3620300..3708658)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 21 NC_051261.1 (3620302..3708446)

Chromosome 24 - NC_051264.2Genomic Context describing neighboring genes Neighboring gene SLAM family member 9 Neighboring gene SLAM family member 9 Neighboring gene uncharacterized LOC122463758 Neighboring gene uncharacterized LOC114020558

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kin of IRRE-like protein 1
Names
Kin of IRRE-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051264.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    3620300..3708658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037883140.2 → XP_037739068.1  kin of IRRE-like protein 1

    Related
    ENSCMYP00015007484.1, ENSCMYT00015009051.1
    Conserved Domains (5) summary
    smart00410
    Location:30 → 119
    IG_like; Immunoglobulin like
    pfam13927
    Location:311 → 376
    Ig_3; Immunoglobulin domain
    cd00096
    Location:328 → 332
    Ig; Ig strand B [structural motif]
    cd05759
    Location:125 → 222
    IgI_2_KIRREL3-like; Second immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
    cd05898
    Location:394 → 491
    IgI_5_KIRREL3; Fifth immunoglobulin (Ig)-like domain of Kirrel (kin of irregular chiasm-like) 3 protein; member of the I-set of Ig superfamily (IgSF) domains
Nucleotide Protein
Heading Accession and Version

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