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SPTSSB serine palmitoyltransferase small subunit B [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102941415, updated on 19-Jun-2024

Summary

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Gene symbol
SPTSSB
Gene description
serine palmitoyltransferase small subunit B
Locus tag
UY3_10122
See related
EnsemblRapid:ENSCMYG00015019532
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
3
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 9 NC_057855.1 (21131778..21150183)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 9 NC_051249.1 (21132339..21150294)

Chromosome 9 - NC_057855.1Genomic Context describing neighboring genes Neighboring gene otolin 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC119567065 Neighboring gene NMD3 ribosome export adaptor Neighboring gene uncharacterized LOC114020254 Neighboring gene uncharacterized LOC122461640

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine palmitoyltransferase small subunit B
Names
Small subunit of serine palmitoyltransferase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057855.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    21131778..21150183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027825510.3 → XP_027681311.1  serine palmitoyltransferase small subunit B

    UniProtKB/TrEMBL
    M7BL00
    Related
    ENSCMYP00015029886.1, ENSCMYT00015036678.1

  2. XM_027825509.3 → XP_027681310.1  serine palmitoyltransferase small subunit B

    UniProtKB/TrEMBL
    M7BL00
    Related
    ENSCMYP00015029889.1, ENSCMYT00015036681.1
Nucleotide Protein
Heading Accession and Version

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