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TAB2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102941166, updated on 10-Mar-2024

Summary

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Gene symbol
TAB2
Gene description
TGF-beta activated kinase 1 (MAP3K7) binding protein 2
Locus tag
UY3_04437
See related
EnsemblRapid:ENSCMYG00015019004
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See TAB2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 3 NC_057851.1 (109523702..109670713)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 3 NC_051243.1 (109523717..109670713)

Chromosome 3 - NC_057851.1Genomic Context describing neighboring genes Neighboring gene SAM and SH3 domain containing 1 Neighboring gene uncharacterized LOC122465080 Neighboring gene uronyl 2-sulfotransferase Neighboring gene uncharacterized LOC122465082 Neighboring gene zinc finger CCCH-type containing 12D Neighboring gene peptidylprolyl isomerase like 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057851.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    109523702..109670713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043543119.1 → XP_043399054.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  2. XM_037894948.2 → XP_037750876.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  3. XM_043543121.1 → XP_043399056.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X3

    Conserved Domains (3) summary
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:542 → 627
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  4. XM_043543114.1 → XP_043399049.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:681 → 704
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:542 → 627
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:682 → 701
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  5. XM_043543116.1 → XP_043399051.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:681 → 704
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:542 → 627
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:682 → 701
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  6. XM_043543113.1 → XP_043399048.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:681 → 704
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:542 → 627
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:682 → 701
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  7. XM_043543115.1 → XP_043399050.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:681 → 704
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:542 → 627
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:682 → 701
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  8. XM_043543120.1 → XP_043399055.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  9. XM_037894947.2 → XP_037750875.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X2

    Related
    ENSCMYP00015029195.1, ENSCMYT00015035754.1
    Conserved Domains (5) summary
    smart00547
    Location:672 → 695
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:541 → 618
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:673 → 692
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  10. XM_043543117.1 → XP_043399052.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:681 → 704
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:542 → 627
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:682 → 701
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  11. XM_043543118.1 → XP_043399053.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X1

    Conserved Domains (5) summary
    smart00547
    Location:681 → 704
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:9 → 50
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR04523
    Location:542 → 627
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:682 → 701
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:201 → 491
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  12. XM_043543122.1 → XP_043399057.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X4

    Conserved Domains (4) summary
    smart00547
    Location:607 → 630
    ZnF_RBZ; Zinc finger domain
    TIGR04523
    Location:468 → 553
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:608 → 627
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:127 → 392
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)

  13. XM_043543123.1 → XP_043399058.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 isoform X5

    Conserved Domains (4) summary
    smart00547
    Location:678 → 701
    ZnF_RBZ; Zinc finger domain
    TIGR04523
    Location:547 → 624
    Mplasa_alph_rch; helix-rich Mycoplasma protein
    sd00029
    Location:679 → 698
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam05109
    Location:207 → 497
    Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
Nucleotide Protein
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