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B3GALT2 beta-1,3-galactosyltransferase 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102940833, updated on 10-Mar-2024

Summary

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Gene symbol
B3GALT2
Gene description
beta-1,3-galactosyltransferase 2
Locus tag
UY3_10039
See related
EnsemblRapid:ENSCMYG00015007096
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See B3GALT2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 8 NC_057854.1 (60074050..60087623, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 8 NC_051248.1 (60080238..60087618, complement)

Chromosome 8 - NC_057854.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119566952 Neighboring gene Ro60, Y RNA binding protein Neighboring gene glutaredoxin 2 Neighboring gene cell division cycle 73 Neighboring gene uncharacterized LOC122461528 Neighboring gene uncharacterized LOC122461496

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057854.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    60074050..60087623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007062987.3 → XP_007063049.1  beta-1,3-galactosyltransferase 2

    See identical proteins and their annotated locations for XP_007063049.1

    UniProtKB/TrEMBL
    M7B6V9
    Related
    ENSCMYP00015010995.1, ENSCMYT00015013277.1
    Conserved Domains (1) summary
    pfam01762
    Location:165 → 359
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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