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ST6GALNAC3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102940238, updated on 10-Mar-2024

Summary

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Gene symbol
ST6GALNAC3
Gene description
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
See related
EnsemblRapid:ENSCMYG00015022310
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See ST6GALNAC3 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 8 NC_057854.1 (82569239..82920620, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 8 NC_051248.1 (82571736..82868199, complement)

Chromosome 8 - NC_057854.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol glycan anchor biosynthesis class K Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 Neighboring gene uncharacterized LOC122461423 Neighboring gene uncharacterized LOC122461568 Neighboring gene small nucleolar RNA SNORD45 Neighboring gene mutS homolog 4 Neighboring gene Rab geranylgeranyltransferase subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057854.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    82569239..82920620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027824999.3 → XP_027680800.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X1

    Related
    ENSCMYP00015033992.1, ENSCMYT00015041940.1

  2. XM_043520975.1 → XP_043376910.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 isoform X2

Nucleotide Protein
Heading Accession and Version

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