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TMED1 transmembrane p24 trafficking protein 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102938306, updated on 10-Mar-2024

Summary

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Gene symbol
TMED1
Gene description
transmembrane p24 trafficking protein 1
Locus tag
UY3_03292
See related
EnsemblRapid:ENSCMYG00015014619
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See TMED1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
4
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 20 NC_051260.2 (17204281..17209625)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 22 Unlocalized Scaffold NW_023618336.1 (1696438..1701516, complement)

Chromosome 20 - NC_051260.2Genomic Context describing neighboring genes Neighboring gene coactivator associated arginine methyltransferase 1 Neighboring gene chromosome 20 C19orf38 homolog Neighboring gene dynamin 2 Neighboring gene uncharacterized LOC119564796 Neighboring gene queuine tRNA-ribosyltransferase catalytic subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 1
Names
Transmembrane emp24 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051260.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    17204281..17209625
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037887830.2 → XP_037743758.1  transmembrane emp24 domain-containing protein 1

    Related
    ENSCMYP00015022553.1, ENSCMYT00015027484.1
    Conserved Domains (1) summary
    pfam01105
    Location:33 → 220
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
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