U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HOOK2 hook microtubule tethering protein 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102936196, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
HOOK2
Gene description
hook microtubule tethering protein 2
Locus tag
UY3_05549
See related
EnsemblRapid:ENSCMYG00015012977
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See HOOK2 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
23
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 20 NC_051260.2 (15856693..15879067)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 22 Unlocalized Scaffold NW_023618336.1 (3026986..3049223, complement)

Chromosome 20 - NC_051260.2Genomic Context describing neighboring genes Neighboring gene peroxiredoxin 2 Neighboring gene JunB proto-oncogene, AP-1 transcription factor subunit Neighboring gene bestrophin 2 Neighboring gene guided entry of tail-anchored proteins factor 3, ATPase

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dynein light intermediate chain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic microtubule organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton-dependent intracellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
protein Hook homolog 2
Names
Protein Hook like protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051260.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    15856693..15879067
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037887965.2 → XP_037743893.1  protein Hook homolog 2 isoform X1

    UniProtKB/TrEMBL
    M7BND6
    Related
    ENSCMYP00015020206.1, ENSCMYT00015024392.1
    Conserved Domains (2) summary
    pfam05622
    Location:201 → 723
    HOOK; HOOK protein
    cd22227
    Location:29 → 178
    HkD_Hook2; Hook domain found in protein Hook 2 (Hook2) and similar proteins

  2. XM_037887966.2 → XP_037743894.1  protein Hook homolog 2 isoform X2

    UniProtKB/TrEMBL
    M7BND6
    Related
    ENSCMYP00015020209.1, ENSCMYT00015024395.1
    Conserved Domains (2) summary
    pfam05622
    Location:201 → 721
    HOOK; HOOK protein
    cd22227
    Location:29 → 178
    HkD_Hook2; Hook domain found in protein Hook 2 (Hook2) and similar proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials