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B3GNT4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102935807, updated on 10-Mar-2024

Summary

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Gene symbol
B3GNT4
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
See related
EnsemblRapid:ENSCMYG00015000726
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See B3GNT4 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
4
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 15 NC_057856.1 (26633582..26639682)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 15 NC_051255.1 (26633959..26639651)

Chromosome 15 - NC_057856.1Genomic Context describing neighboring genes Neighboring gene MLX interacting protein Neighboring gene leucine rich repeat containing 43 Neighboring gene diablo IAP-binding mitochondrial protein Neighboring gene VPS33A core subunit of CORVET and HOPS complexes Neighboring gene uncharacterized LOC122463065

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057856.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    26633582..26639682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037878714.2 → XP_037734642.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4

    Conserved Domains (1) summary
    cl21608
    Location:115 → 307
    Galactosyl_T; Galactosyltransferase

  2. XM_043529386.1 → XP_043385321.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4

    Related
    ENSCMYP00015001022.1, ENSCMYT00015001355.1
    Conserved Domains (1) summary
    cl21608
    Location:115 → 307
    Galactosyl_T; Galactosyltransferase

  3. XM_043529385.1 → XP_043385320.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4

    Conserved Domains (1) summary
    cl21608
    Location:115 → 307
    Galactosyl_T; Galactosyltransferase

  4. XM_043529387.1 → XP_043385322.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4

    Conserved Domains (1) summary
    cl21608
    Location:115 → 307
    Galactosyl_T; Galactosyltransferase

  5. XM_043529388.1 → XP_043385323.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4

    Related
    ENSCMYP00015001018.1, ENSCMYT00015001351.1
    Conserved Domains (1) summary
    cl21608
    Location:115 → 307
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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