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NDST2 N-deacetylase and N-sulfotransferase 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102934951, updated on 10-Mar-2024

Summary

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Gene symbol
NDST2
Gene description
N-deacetylase and N-sulfotransferase 2
Locus tag
UY3_14438
See related
EnsemblRapid:ENSCMYG00015010323
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See NDST2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
23
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 7 NC_057853.1 (53109448..53349014, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 7 NC_051247.1 (53111520..53349022, complement)

Chromosome 7 - NC_057853.1Genomic Context describing neighboring genes Neighboring gene neurotrypsin-like Neighboring gene zinc finger SWIM-type containing 8 Neighboring gene calcium/calmodulin dependent protein kinase II gamma Neighboring gene acyl-CoA desaturase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
Names
Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2
N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057853.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    53109448..53349014 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043550909.1 → XP_043406844.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase

  2. XM_043550913.1 → XP_043406848.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase

  3. XM_043550914.1 → XP_043406849.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase

  4. XM_043550910.1 → XP_043406845.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase

  5. XM_043550908.1 → XP_043406843.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase

  6. XM_043550912.1 → XP_043406847.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase

  7. XM_043550911.1 → XP_043406846.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase

  8. XM_043550917.1 → XP_043406852.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase

  9. XM_043550916.1 → XP_043406851.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Related
    ENSCMYP00015015966.1, ENSCMYT00015019361.1
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase

  10. XM_043550915.1 → XP_043406850.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2

    UniProtKB/TrEMBL
    M7ASV9
    Conserved Domains (2) summary
    pfam00685
    Location:599 → 850
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:25 → 510
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
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