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PLA2G6 phospholipase A2 group VI [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102932915, updated on 10-Mar-2024

Summary

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Gene symbol
PLA2G6
Gene description
phospholipase A2 group VI
Locus tag
UY3_15874
See related
EnsemblRapid:ENSCMYG00015025352
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See PLA2G6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
24
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (255255025..255281657, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (255255397..255281529, complement)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 8 Neighboring gene BAR/IMD domain containing adaptor protein 2 like 2 Neighboring gene MAF bZIP transcription factor F Neighboring gene transmembrane protein 184B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-independent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiolipin acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
85/88 kDa calcium-independent phospholipase A2
Names
85 kDa calcium-independent phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    255255025..255281657 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037881410.2 → XP_037737338.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Related
    ENSCMYP00015038693.1, ENSCMYT00015047633.1
    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_043543275.1 → XP_043399210.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

    Conserved Domains (4) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    cl39094
    Location:143 → 381
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_043543236.1 → XP_043399171.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    Conserved Domains (5) summary
    cd07212
    Location:473 → 786
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA03095
    Location:231 → 476
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_043543193.1 → XP_043399128.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  5. XM_037881382.2 → XP_037737310.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  6. XM_043543244.1 → XP_043399179.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    Conserved Domains (5) summary
    cd07212
    Location:473 → 786
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA03095
    Location:231 → 476
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  7. XM_037881405.2 → XP_037737333.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Related
    ENSCMYP00015038687.1, ENSCMYT00015047627.1
    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  8. XM_043543214.1 → XP_043399149.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  9. XM_043543223.1 → XP_043399158.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  10. XM_043543226.1 → XP_043399161.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  11. XM_043543240.1 → XP_043399175.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    Related
    ENSCMYP00015038692.1, ENSCMYT00015047632.1
    Conserved Domains (5) summary
    cd07212
    Location:473 → 786
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA03095
    Location:231 → 476
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  12. XM_043543272.1 → XP_043399207.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

    Conserved Domains (4) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    cl39094
    Location:143 → 381
    Ank_2; Ankyrin repeats (3 copies)

  13. XM_043543232.1 → XP_043399167.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    Conserved Domains (5) summary
    cd07212
    Location:473 → 786
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA03095
    Location:231 → 476
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  14. XM_043543254.1 → XP_043399189.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

    Conserved Domains (4) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    cl39094
    Location:143 → 381
    Ank_2; Ankyrin repeats (3 copies)

  15. XM_043543268.1 → XP_043399203.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

    Conserved Domains (4) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    cl39094
    Location:143 → 381
    Ank_2; Ankyrin repeats (3 copies)

  16. XM_043543181.1 → XP_043399116.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  17. XM_043543175.1 → XP_043399110.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  18. XM_043543260.1 → XP_043399195.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

    Conserved Domains (4) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    cl39094
    Location:143 → 381
    Ank_2; Ankyrin repeats (3 copies)

  19. XM_043543262.1 → XP_043399197.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

    Conserved Domains (4) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    cl39094
    Location:143 → 381
    Ank_2; Ankyrin repeats (3 copies)

  20. XM_043543197.1 → XP_043399132.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  21. XM_043543278.1 → XP_043399213.1  85/88 kDa calcium-independent phospholipase A2 isoform X3

    Related
    ENSCMYP00015038690.1, ENSCMYT00015047630.1
    Conserved Domains (4) summary
    cd07212
    Location:429 → 742
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    cl39094
    Location:143 → 381
    Ank_2; Ankyrin repeats (3 copies)

  22. XM_043543248.1 → XP_043399183.1  85/88 kDa calcium-independent phospholipase A2 isoform X2

    Conserved Domains (5) summary
    cd07212
    Location:473 → 786
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PHA03095
    Location:231 → 476
    PHA03095; ankyrin-like protein; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  23. XM_043543189.1 → XP_043399124.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  24. XM_037881399.2 → XP_037737327.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  25. XM_037881391.2 → XP_037737319.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

  26. XM_037881378.2 → XP_037737306.1  85/88 kDa calcium-independent phospholipase A2 isoform X1

    Conserved Domains (5) summary
    cd07212
    Location:483 → 796
    Pat_PNPLA9; Patatin-like phospholipase domain containing protein 9
    PTZ00322
    Location:332 → 442
    PTZ00322; 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional
    COG0666
    Location:67 → 207
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:151 → 182
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:156 → 248
    Ank_2; Ankyrin repeats (3 copies)

RNA

  1. XR_006289694.1 RNA Sequence

  2. XR_006289695.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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