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GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102932871, updated on 10-Mar-2024

Summary

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Gene symbol
GALNT18
Gene description
polypeptide N-acetylgalactosaminyltransferase 18
Locus tag
UY3_06001
See related
EnsemblRapid:ENSCMYG00015013270
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See GALNT18 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 6 NC_051246.2 (38401093..38770767, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 5 NC_051245.1 (38401087..38770722, complement)

Chromosome 6 - NC_051246.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122466424 Neighboring gene cytochrome c oxidase subunit 7A2, mitochondrial-like Neighboring gene uncharacterized LOC122466257 Neighboring gene uncharacterized LOC122466258 Neighboring gene uncharacterized LOC114019243 Neighboring gene ubiquitin specific peptidase 47

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 18
Names
Putative polypeptide N-acetylgalactosaminyltransferase-like protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051246.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    38401093..38770767 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037899815.2 → XP_037755743.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X2

    Related
    ENSCMYP00015020595.1, ENSCMYT00015024928.1
    Conserved Domains (2) summary
    cd02510
    Location:157 → 458
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:471 → 598
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_037899817.2 → XP_037755745.2  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    Related
    ENSCMYP00015020591.1, ENSCMYT00015024924.1
    Conserved Domains (2) summary
    cd02510
    Location:233 → 534
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:547 → 674
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  3. XM_043548940.1 → XP_043404875.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

    Conserved Domains (1) summary
    cd02510
    Location:157 → 458
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
Nucleotide Protein
Heading Accession and Version

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