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CPTP ceramide-1-phosphate transfer protein [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102932774, updated on 10-Mar-2024

Summary

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Gene symbol
CPTP
Gene description
ceramide-1-phosphate transfer protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See CPTP in Genome Data Viewer
Location:
chromosome: 18
Exon count:
2
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 18 NC_051258.2 (15798668..15803463)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 18 NC_051258.1 (7527280..7532080, complement)

Chromosome 18 - NC_051258.2Genomic Context describing neighboring genes Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 Neighboring gene uncharacterized LOC122463251 Neighboring gene pseudouridine synthase like 1 Neighboring gene integrator complex subunit 11 Neighboring gene taste 1 receptor member 3 Neighboring gene dishevelled segment polarity protein 1 Neighboring gene uncharacterized LOC119563932

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ceramide 1-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ceramide 1-phosphate transfer activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermembrane lipid transfer IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ceramide-1-phosphate transfer protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051258.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    15798668..15803463
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037881144.2 → XP_037737072.1  ceramide-1-phosphate transfer protein

    Conserved Domains (1) summary
    pfam08718
    Location:113 → 253
    GLTP; Glycolipid transfer protein (GLTP)
Nucleotide Protein
Heading Accession and Version

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