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INPP5E inositol polyphosphate-5-phosphatase E [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102932373, updated on 10-Mar-2024

Summary

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Gene symbol
INPP5E
Gene description
inositol polyphosphate-5-phosphatase E
See related
EnsemblRapid:ENSCMYG00015003691
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See INPP5E in Genome Data Viewer
Location:
chromosome: 16
Exon count:
11
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 16 NC_057857.1 (19114716..19135162)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 16 NC_051256.1 (19114730..19129945)

Chromosome 16 - NC_057857.1Genomic Context describing neighboring genes Neighboring gene notch receptor 1 Neighboring gene SEC16 homolog A, endoplasmic reticulum export factor Neighboring gene peptidase, mitochondrial processing subunit alpha Neighboring gene endosome associated trafficking regulator 1 Neighboring gene small nuclear RNA activating complex polypeptide 4 Neighboring gene caspase recruitment domain family member 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol polyphosphate 5-phosphatase type IV

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057857.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    19114716..19135162
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037879462.2 → XP_037735390.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X1

    Related
    ENSCMYP00015005681.1, ENSCMYT00015006862.1
    Conserved Domains (1) summary
    cd09095
    Location:307 → 605
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins

  2. XM_037879464.2 → XP_037735392.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X2

    Conserved Domains (1) summary
    cd09095
    Location:307 → 605
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins

  3. XM_037879463.2 → XP_037735391.1  phosphatidylinositol polyphosphate 5-phosphatase type IV isoform X1

    Conserved Domains (1) summary
    cd09095
    Location:307 → 605
    INPP5c_INPP5E-like; Catalytic inositol polyphosphate 5-phosphatase (INPP5c) domain of Inositol polyphosphate-5-phosphatase E and related proteins

RNA

  1. XR_006286132.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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