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AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102931820, updated on 10-Mar-2024

Summary

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Gene symbol
AGPAT5
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 5
Locus tag
UY3_02527
See related
EnsemblRapid:ENSCMYG00015001006
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See AGPAT5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
8
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 3 NC_057851.1 (43253237..43373435)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 3 NC_051243.1 (43253236..43373565)

Chromosome 3 - NC_057851.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122465331 Neighboring gene microcephalin 1 Neighboring gene angiopoietin 2 Neighboring gene glutathione S-transferase Neighboring gene transmembrane protein 14A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057851.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    43253237..43373435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043542357.1 → XP_043398292.1  1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X2

    Conserved Domains (2) summary
    cd07990
    Location:63 → 194
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    PLN02510
    Location:13 → 280
    PLN02510; probable 1-acyl-sn-glycerol-3-phosphate acyltransferase

  2. XM_007055053.4 → XP_007055115.2  1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon isoform X1

    Related
    ENSCMYP00015001531.1, ENSCMYT00015001892.1
    Conserved Domains (2) summary
    cd07990
    Location:63 → 264
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:259 → 328
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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