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MTMR6 myotubularin related protein 6 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102931382, updated on 10-Mar-2024

Summary

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Gene symbol
MTMR6
Gene description
myotubularin related protein 6
Locus tag
UY3_06389
See related
EnsemblRapid:ENSCMYG00015024857
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See MTMR6 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 1 NC_057849.1 (43130921..43162070, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 1 NC_051241.1 (43127410..43160911, complement)

Chromosome 1 - NC_057849.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122462012 Neighboring gene APC membrane recruitment protein 2 Neighboring gene uncharacterized LOC119565444 Neighboring gene nucleoporin 58

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-3,5-bisphosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myotubularin-related protein 6
Names
Myotubularin-related protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057849.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    43130921..43162070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043530934.1 → XP_043386869.1  myotubularin-related protein 6 isoform X3

    Conserved Domains (1) summary
    cl28904
    Location:1 → 295
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  2. XM_037891307.2 → XP_037747235.1  myotubularin-related protein 6 isoform X2

    UniProtKB/TrEMBL
    M7C769
    Related
    ENSCMYP00015037971.1, ENSCMYT00015046747.1
    Conserved Domains (2) summary
    cd13343
    Location:1 → 101
    PH-GRAM_MTMR6; Myotubularian (MTM) related (MTMR) 6 protein Pleckstrin Homology-Glucosyltransferases, Rab-like GTPase activators and Myotubularins (PH-GRAM) domain
    cl28904
    Location:130 → 431
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  3. XM_043530940.1 → XP_043386875.1  myotubularin-related protein 6 isoform X3

    Conserved Domains (1) summary
    cl28904
    Location:1 → 295
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily

  4. XM_043530930.1 → XP_043386865.1  myotubularin-related protein 6 isoform X1

    UniProtKB/TrEMBL
    M7C769
    Related
    ENSCMYP00015037966.1, ENSCMYT00015046742.1
    Conserved Domains (2) summary
    cl17171
    Location:18 → 111
    PH-like; Pleckstrin homology-like domain
    cl28904
    Location:140 → 441
    PTP_DSP_cys; cys-based protein tyrosine phosphatase and dual-specificity phosphatase superfamily
Nucleotide Protein
Heading Accession and Version

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