U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PNPLA2 patatin like phospholipase domain containing 2 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102931307, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Gene symbol
PNPLA2
Gene description
patatin like phospholipase domain containing 2
Locus tag
UY3_08101
See related
EnsemblRapid:ENSCMYG00015019122
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See PNPLA2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 6 NC_051246.2 (24737863..24790212)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 5 NC_051245.1 (24737877..24787773)

Chromosome 6 - NC_051246.2Genomic Context describing neighboring genes Neighboring gene p53-induced death domain protein 1 Neighboring gene small nucleolar RNA SNORA52 Neighboring gene ribosomal protein lateral stalk subunit P2 Neighboring gene calcium release activated channel regulator 2B Neighboring gene uncharacterized LOC122466111 Neighboring gene late histone H2A.1-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
patatin-like phospholipase domain-containing protein 2
Names
Patatin-like phospholipase domain-containing protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051246.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    24737863..24790212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037899587.2 → XP_037755515.1  patatin-like phospholipase domain-containing protein 2 isoform X1

    UniProtKB/TrEMBL
    M7BC28
    Related
    ENSCMYP00015029339.1, ENSCMYT00015035922.1
    Conserved Domains (1) summary
    cd07220
    Location:4 → 252
    Pat_PNPLA2; Patatin-like phospholipase domain containing protein 2

  2. XM_037899588.2 → XP_037755516.1  patatin-like phospholipase domain-containing protein 2 isoform X2

    UniProtKB/TrEMBL
    M7BC28
    Conserved Domains (1) summary
    cd07220
    Location:4 → 252
    Pat_PNPLA2; Patatin-like phospholipase domain containing protein 2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.