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ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102931030, updated on 10-Mar-2024

Summary

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Gene symbol
ASAP1
Gene description
ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
Locus tag
UY3_11151
See related
EnsemblRapid:ENSCMYG00015021253
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See ASAP1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
35
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (17903196..18275636)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (17903285..18275634)

Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene adenylate cyclase 8 Neighboring gene uncharacterized LOC119565545 Neighboring gene uncharacterized LOC122464213 Neighboring gene elongation factor 1-alpha Neighboring gene CYFIP related Rac1 interactor B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    17903196..18275636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043539090.1 → XP_043395025.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X4

    Conserved Domains (7) summary
    cd07641
    Location:55 → 269
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1072 → 1128
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:725 → 1025
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:317 → 423
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:602 → 635
    ANK; ANK repeat [structural motif]
    cd08848
    Location:438 → 558
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
    pfam12796
    Location:606 → 690
    Ank_2; Ankyrin repeats (3 copies)

  2. XM_037892008.2 → XP_037747936.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X3

    Conserved Domains (7) summary
    cd07641
    Location:55 → 269
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1075 → 1131
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:728 → 1028
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:320 → 426
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:605 → 638
    ANK; ANK repeat [structural motif]
    cd08848
    Location:441 → 561
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
    pfam12796
    Location:609 → 693
    Ank_2; Ankyrin repeats (3 copies)

  3. XM_043539091.1 → XP_043395026.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X4

    Conserved Domains (7) summary
    cd07641
    Location:55 → 269
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1072 → 1128
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:725 → 1025
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:317 → 423
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:602 → 635
    ANK; ANK repeat [structural motif]
    cd08848
    Location:438 → 558
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
    pfam12796
    Location:606 → 690
    Ank_2; Ankyrin repeats (3 copies)

  4. XM_043539088.1 → XP_043395023.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X1

    Conserved Domains (7) summary
    cd07641
    Location:55 → 269
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1093 → 1149
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:728 → 1046
    PHA03247; large tegument protein UL36; Provisional
    COG0666
    Location:604 → 700
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd13251
    Location:320 → 426
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:605 → 638
    ANK; ANK repeat [structural motif]
    cd08848
    Location:441 → 561
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  5. XM_043539089.1 → XP_043395024.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X2

    Conserved Domains (7) summary
    cd07641
    Location:55 → 269
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1090 → 1146
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:725 → 1043
    PHA03247; large tegument protein UL36; Provisional
    COG0666
    Location:601 → 697
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd13251
    Location:317 → 423
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:602 → 635
    ANK; ANK repeat [structural motif]
    cd08848
    Location:438 → 558
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)

  6. XM_037892009.2 → XP_037747937.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X4

    Related
    ENSCMYP00015032238.1, ENSCMYT00015039925.1
    Conserved Domains (7) summary
    cd07641
    Location:55 → 269
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1072 → 1128
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:725 → 1025
    PHA03247; large tegument protein UL36; Provisional
    cd13251
    Location:317 → 423
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:602 → 635
    ANK; ANK repeat [structural motif]
    cd08848
    Location:438 → 558
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
    pfam12796
    Location:606 → 690
    Ank_2; Ankyrin repeats (3 copies)

  7. XM_043539092.1 → XP_043395027.1  arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 isoform X5

    Conserved Domains (7) summary
    cd07641
    Location:34 → 248
    BAR_ASAP1; The Bin/Amphiphysin/Rvs (BAR) domain of ArfGAP with SH3 domain, ANK repeat and PH domain containing protein 1
    cd11965
    Location:1069 → 1125
    SH3_ASAP1; Src homology 3 domain of ArfGAP with SH3 domain, ankyrin repeat and PH domain containing protein 1
    PHA03247
    Location:704 → 1022
    PHA03247; large tegument protein UL36; Provisional
    COG0666
    Location:580 → 676
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    cd13251
    Location:296 → 402
    PH_ASAP; ArfGAP with SH3 domain, ankyrin repeat and PH domain Pleckstrin homology (PH) domain
    sd00045
    Location:581 → 614
    ANK; ANK repeat [structural motif]
    cd08848
    Location:417 → 537
    ArfGap_ASAP1; ArfGAP domain of ASAP1 (ArfGAP with SH3 domain, ANK repeat and PH domain-containing protein 1)
Nucleotide Protein
Heading Accession and Version

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