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HS3ST1 heparan sulfate-glucosamine 3-sulfotransferase 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102930942, updated on 10-Mar-2024

Summary

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Gene symbol
HS3ST1
Gene description
heparan sulfate-glucosamine 3-sulfotransferase 1
Locus tag
UY3_10008
See related
EnsemblRapid:ENSCMYG00015015778
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See HS3ST1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 4 NC_057852.1 (114042121..114056440)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 4 NC_051244.1 (114042440..114058001)

Chromosome 4 - NC_057852.1Genomic Context describing neighboring genes Neighboring gene transfer RNA leucine (anticodon AAG) Neighboring gene uncharacterized LOC122465578 Neighboring gene uncharacterized LOC122465389 Neighboring gene U2 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sea turtle fibropapilloma tumors share genomic drivers and therapeutic vulnerabilities with human cancers. Duffy DJ, et al. Commun Biol, 2018. PMID 30271945, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 1
Names
Heparan sulfate glucosamine 3-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057852.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    114042121..114056440
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037898057.2 → XP_037753985.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    M7B4P3
    Related
    ENSCMYP00015024288.1, ENSCMYT00015029670.1
    Conserved Domains (1) summary
    pfam00685
    Location:62 → 299
    Sulfotransfer_1; Sulfotransferase domain

  2. XM_037898058.2 → XP_037753986.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    M7B4P3
    Related
    ENSCMYP00015024290.1, ENSCMYT00015029674.1
    Conserved Domains (1) summary
    pfam00685
    Location:62 → 299
    Sulfotransfer_1; Sulfotransferase domain

  3. XM_043544645.1 → XP_043400580.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    M7B4P3
    Conserved Domains (1) summary
    pfam00685
    Location:62 → 299
    Sulfotransfer_1; Sulfotransferase domain

  4. XM_043544646.1 → XP_043400581.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    M7B4P3
    Related
    ENSCMYP00015024283.1, ENSCMYT00015029664.1
    Conserved Domains (1) summary
    pfam00685
    Location:62 → 299
    Sulfotransfer_1; Sulfotransferase domain

  5. XM_043544647.1 → XP_043400582.1  heparan sulfate glucosamine 3-O-sulfotransferase 1

    UniProtKB/TrEMBL
    M7B4P3
    Related
    ENSCMYP00015024275.1, ENSCMYT00015029652.1
    Conserved Domains (1) summary
    pfam00685
    Location:62 → 299
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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