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AMACR alpha-methylacyl-CoA racemase [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102930451, updated on 10-Mar-2024

Summary

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Gene symbol
AMACR
Gene description
alpha-methylacyl-CoA racemase
See related
EnsemblRapid:ENSCMYG00015004429
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See AMACR in Genome Data Viewer
Location:
chromosome: 5
Exon count:
5
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 5 NC_051245.2 (23715206..23738447, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 6 NC_051246.1 (23714366..23738431, complement)

Chromosome 5 - NC_051245.2Genomic Context describing neighboring genes Neighboring gene relaxin family peptide receptor 3 Neighboring gene solute carrier family 45 member 2 Neighboring gene uncharacterized LOC122466032 Neighboring gene C1q and TNF related 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-methylacyl-CoA racemase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in bile acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-methylacyl-CoA racemase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_051245.2 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    23715206..23738447 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037902626.2 → XP_037758554.1  alpha-methylacyl-CoA racemase

    Related
    ENSCMYP00015006846.1, ENSCMYT00015008222.1
    Conserved Domains (1) summary
    COG1804
    Location:3 → 374
    CaiB; Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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