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LPCAT1 lysophosphatidylcholine acyltransferase 1 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102930396, updated on 10-Mar-2024

Summary

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Gene symbol
LPCAT1
Gene description
lysophosphatidylcholine acyltransferase 1
Locus tag
UY3_00142
See related
EnsemblRapid:ENSCMYG00015024600
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See LPCAT1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (143022514..143206563, complement)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (143029182..143203771, complement)

Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119565645 Neighboring gene telomerase reverse transcriptase Neighboring gene CLPTM1 like Neighboring gene uncharacterized LOC122464306 Neighboring gene uncharacterized LOC122464595

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidylcholine acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    143022514..143206563 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043540303.1 → XP_043396238.1  lysophosphatidylcholine acyltransferase 1 isoform X5

    Related
    ENSCMYP00015037519.1, ENSCMYT00015046247.1
    Conserved Domains (2) summary
    cd07991
    Location:55 → 266
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
    COG5126
    Location:318 → 427
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  2. XM_037893384.2 → XP_037749312.2  lysophosphatidylcholine acyltransferase 1 isoform X1

    Conserved Domains (2) summary
    cd07991
    Location:233 → 444
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
    COG5126
    Location:496 → 605
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  3. XM_043540302.1 → XP_043396237.1  lysophosphatidylcholine acyltransferase 1 isoform X5

    Conserved Domains (2) summary
    cd07991
    Location:55 → 266
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
    COG5126
    Location:318 → 427
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  4. XM_043540301.1 → XP_043396236.1  lysophosphatidylcholine acyltransferase 1 isoform X4

    Conserved Domains (2) summary
    cd07991
    Location:61 → 272
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
    COG5126
    Location:324 → 433
    FRQ1; Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms]

  5. XM_037893385.2 → XP_037749313.1  lysophosphatidylcholine acyltransferase 1 isoform X2

    Conserved Domains (1) summary
    cd07991
    Location:162 → 373
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like

  6. XM_043540300.1 → XP_043396235.1  lysophosphatidylcholine acyltransferase 1 isoform X3

    Conserved Domains (1) summary
    cd07991
    Location:162 → 373
    LPLAT_LPCAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LPCAT1-like
Nucleotide Protein
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