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GALNT9 polypeptide N-acetylgalactosaminyltransferase 9 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102930323, updated on 10-Mar-2024

Summary

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Gene symbol
GALNT9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
See related
EnsemblRapid:ENSCMYG00015006757
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See GALNT9 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
14
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 15 NC_057856.1 (19094199..19419694)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 15 NC_051255.1 (19209159..19419752)

Chromosome 15 - NC_057856.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122463072 Neighboring gene uncharacterized LOC122463084 Neighboring gene nucleolar complex associated 4 homolog Neighboring gene E1A binding protein p400

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057856.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    19094199..19419694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_043529609.1 → XP_043385544.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X5

    Conserved Domains (2) summary
    cd02510
    Location:51 → 350
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:363 → 491
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  2. XM_043529608.1 → XP_043385543.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X4

    Conserved Domains (2) summary
    cd02510
    Location:70 → 369
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:382 → 510
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

  3. XM_037879090.2 → XP_037735018.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X1

    Related
    ENSCMYP00015010494.1, ENSCMYT00015012671.1
    Conserved Domains (2) summary
    cd02510
    Location:156 → 455
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:466 → 594
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  4. XM_037879092.2 → XP_037735020.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X3

    Conserved Domains (2) summary
    pfam00652
    Location:400 → 528
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    cl11394
    Location:156 → 389
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  5. XM_037879091.2 → XP_037735019.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X2

    Conserved Domains (2) summary
    cd02510
    Location:156 → 425
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:446 → 572
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  6. XM_043529610.1 → XP_043385545.1  polypeptide N-acetylgalactosaminyltransferase 9 isoform X6

    Conserved Domains (2) summary
    cd00161
    Location:100 → 228
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    cl11394
    Location:1 → 87
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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