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SLC35B3 solute carrier family 35 member B3 [ Chelonia mydas (Green sea turtle) ]

Gene ID: 102929335, updated on 10-Mar-2024

Summary

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Gene symbol
SLC35B3
Gene description
solute carrier family 35 member B3
Locus tag
UY3_11221
See related
EnsemblRapid:ENSCMYG00015004909
Gene type
protein coding
RefSeq status
MODEL
Organism
Chelonia mydas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Americhelydia; Chelonioidea; Cheloniidae; Chelonia
Orthologs
human mouse all
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Genomic context

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See SLC35B3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
103 current rCheMyd1.pri.v2 (GCF_015237465.2) 2 NC_057850.1 (113109726..113145232)
102 previous assembly rCheMyd1.pri (GCF_015237465.1) 2 NC_051242.1 (113109732..113147042)

Chromosome 2 - NC_057850.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122464548 Neighboring gene uncharacterized LOC122464547 Neighboring gene uncharacterized LOC122464549 Neighboring gene eukaryotic translation elongation factor 1 epsilon 1 Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adenosine 3'-phospho 5'-phosphosulfate transporter 2
Names
Adenosine 3'-phospho 5'-phosphosulfate transporter 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chelonia mydas Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rCheMyd1.pri.v2 Primary Assembly

Genomic

  1. NC_057850.1 Reference rCheMyd1.pri.v2 Primary Assembly

    Range
    113109726..113145232
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_037893184.2 → XP_037749112.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2

    UniProtKB/TrEMBL
    M7B3I0
    Related
    ENSCMYP00015007579.1, ENSCMYT00015009176.1
    Conserved Domains (1) summary
    pfam08449
    Location:48 → 339
    UAA; UAA transporter family

  2. XM_037893182.2 → XP_037749110.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X3

    UniProtKB/TrEMBL
    M7B3I0
    Related
    ENSCMYP00015007574.1, ENSCMYT00015009169.1
    Conserved Domains (1) summary
    pfam08449
    Location:48 → 308
    UAA; UAA transporter family

  3. XM_037893179.2 → XP_037749107.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2

    UniProtKB/TrEMBL
    M7B3I0
    Conserved Domains (1) summary
    pfam08449
    Location:48 → 339
    UAA; UAA transporter family

  4. XM_037893178.2 → XP_037749106.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2

    UniProtKB/TrEMBL
    M7B3I0
    Conserved Domains (1) summary
    pfam08449
    Location:48 → 339
    UAA; UAA transporter family

  5. XM_043540138.1 → XP_043396073.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X1

    UniProtKB/TrEMBL
    M7B3I0
    Conserved Domains (1) summary
    pfam08449
    Location:79 → 370
    UAA; UAA transporter family

  6. XM_027826678.3 → XP_027682479.1  adenosine 3'-phospho 5'-phosphosulfate transporter 2 isoform X2

    UniProtKB/TrEMBL
    M7B3I0
    Conserved Domains (1) summary
    pfam08449
    Location:48 → 339
    UAA; UAA transporter family

RNA

  1. XR_006288698.1 RNA Sequence

Nucleotide Protein
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