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Hbs1l HBS1 like translational GTPase [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102926828, updated on 10-Mar-2024

Summary

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Gene symbol
Hbs1l
Gene description
HBS1 like translational GTPase
See related
Ensembl:ENSPEMG00000014369
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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See Hbs1l in Genome Data Viewer
Location:
chromosome: 16
Exon count:
20
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 16 NC_056023.1 (33801675..33873636, complement)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501173.1 (1896422..1968231, complement)

Chromosome 16 - NC_056023.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121823183 Neighboring gene aldehyde dehydrogenase 8 family member A1 Neighboring gene uncharacterized LOC121823185 Neighboring gene metallothionein-1-like Neighboring gene uncharacterized LOC121823116 Neighboring gene uncharacterized LOC121823117

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
HBS1-like protein
Names
HBS1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056023.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    33801675..33873636 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006980105.3 → XP_006980167.2  HBS1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A6I9LP41
    Conserved Domains (1) summary
    COG5256
    Location:251 → 679
    TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

  2. XM_006980104.3 → XP_006980166.2  HBS1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6I9LAB6, A0A8C8TN90
    Conserved Domains (1) summary
    COG5256
    Location:254 → 682
    TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

  3. XM_042262213.1 → XP_042118147.1  HBS1-like protein isoform X4

    Conserved Domains (1) summary
    COG5256
    Location:94 → 522
    TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

  4. XM_042262214.1 → XP_042118148.1  HBS1-like protein isoform X4

    Conserved Domains (1) summary
    COG5256
    Location:94 → 522
    TEF1; Translation elongation factor EF-1alpha (GTPase) [Translation, ribosomal structure and biogenesis]

  5. XM_042262212.1 → XP_042118146.1  HBS1-like protein isoform X3

    UniProtKB/TrEMBL
    A0A8C8W7P9
Nucleotide Protein
Heading Accession and Version

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