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Rexo2 RNA exonuclease 2 [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102917952, updated on 10-Mar-2024

Summary

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Gene symbol
Rexo2
Gene description
RNA exonuclease 2
See related
Ensembl:ENSPEMG00000001421
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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See Rexo2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
8
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 7 NC_056014.1 (43407229..43420024, complement)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501163.1 (743242..756045)

Chromosome 7 - NC_056014.1Genomic Context describing neighboring genes Neighboring gene NXPE family member 4-like Neighboring gene NXPE family member 2 Neighboring gene NXPE family member 1 Neighboring gene NXPE family member 4-like Neighboring gene chromosome 7 C11orf71 homolog Neighboring gene RNA binding motif protein 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oligoribonuclease, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056014.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    43407229..43420024 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_042280866.1 → XP_042136800.1  oligoribonuclease, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8C8T263
    Conserved Domains (1) summary
    cd06135
    Location:43 → 215
    Orn; DEDDh 3'-5' exonuclease domain of oligoribonuclease and similar proteins

  2. XM_042280867.1 → XP_042136801.1  oligoribonuclease, mitochondrial isoform X2

    Conserved Domains (1) summary
    cl10012
    Location:39 → 103
    DnaQ_like_exo; DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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