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Lrpprc leucine rich pentatricopeptide repeat containing [ Peromyscus maniculatus bairdii (prairie deer mouse) ]

Gene ID: 102903029, updated on 10-Mar-2024

Summary

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Gene symbol
Lrpprc
Gene description
leucine rich pentatricopeptide repeat containing
See related
Ensembl:ENSPEMG00000022720
Gene type
protein coding
RefSeq status
MODEL
Organism
Peromyscus maniculatus bairdii (sub-species: bairdii)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Neotominae; Peromyscus
Orthologs
human mouse all
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Genomic context

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See Lrpprc in Genome Data Viewer
Location:
chromosome: 22
Exon count:
39
Annotation release Status Assembly Chr Location
102 current HU_Pman_2.1.3 (GCF_003704035.1) 22 NC_056029.1 (19757089..19860580)
101 previous assembly Pman_1.0 (GCF_000500345.1) Unplaced Scaffold NW_006501333.1 (3763941..3855547)

Chromosome 22 - NC_056029.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 C-like Neighboring gene solute carrier family 3 member 1 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B Neighboring gene ATP binding cassette subfamily G member 8 Neighboring gene ATP binding cassette subfamily G member 5 Neighboring gene dynein cytoplasmic 2 light intermediate chain 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich PPR motif-containing protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Peromyscus maniculatus bairdii Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HU_Pman_2.1.3 Primary Assembly

Genomic

  1. NC_056029.1 Reference HU_Pman_2.1.3 Primary Assembly

    Range
    19757089..19860580
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006986513.3 → XP_006986575.1  leucine-rich PPR motif-containing protein, mitochondrial

    UniProtKB/TrEMBL
    A0A6I9LMD5, A0A8C8U4M2
    Related
    ENSPEMP00000026695.1
    Conserved Domains (5) summary
    sd00004
    Location:196 → 223
    PPR; PPR repeat [structural motif]
    pfam01535
    Location:745 → 773
    PPR; PPR repeat
    pfam12854
    Location:189 → 221
    PPR_1; PPR repeat
    pfam13041
    Location:192 → 241
    PPR_2; PPR repeat family
    pfam13812
    Location:229 → 262
    PPR_3; Pentatricopeptide repeat domain

RNA

  1. XR_006067241.1 RNA Sequence

  2. XR_006067242.1 RNA Sequence

Nucleotide Protein
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