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SFMBT1 Scm like with four mbt domains 1 [ Felis catus (domestic cat) ]

Gene ID: 102901972, updated on 17-Aug-2024

Summary

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Official Symbol
SFMBT1
Official Full Name
Scm like with four mbt domains 1
Primary source
VGNC:VGNC:65061
See related
EnsemblRapid:ENSFCTG00005023753
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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See SFMBT1 in Genome Data Viewer
Location:
chromosome: A2
Exon count:
30
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A2 NC_058369.1 (21482698..21617779, complement)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A2 NC_018724.3 (21437268..21573793, complement)

Chromosome A2 - NC_058369.1Genomic Context describing neighboring genes Neighboring gene STIM activating enhancer Neighboring gene musculoskeletal, embryonic nuclear protein 1 Neighboring gene uncharacterized LOC123383523 Neighboring gene RFT1 homolog Neighboring gene uncharacterized LOC123383524 Neighboring gene protein kinase C delta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
scm-like with four MBT domains protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058369.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    21482698..21617779 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045051367.1 → XP_044907302.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  2. XM_045051387.1 → XP_044907322.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  3. XM_045051376.1 → XP_044907311.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  4. XM_045051355.1 → XP_044907290.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  5. XM_045051371.1 → XP_044907306.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  6. XM_023249657.2 → XP_023105425.1  scm-like with four MBT domains protein 1 isoform X2

    UniProtKB/TrEMBL
    M3W157
    Related
    ENSFCTP00005048740.1, ENSFCTT00005067848.1
    Conserved Domains (3) summary
    cd09581
    Location:782 → 866
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2
    pfam12140
    Location:502 → 617
    SLED; SLED domain

  7. XM_045051359.1 → XP_044907294.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  8. XM_045051365.1 → XP_044907300.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  9. XM_045051368.1 → XP_044907303.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  10. XM_045051383.1 → XP_044907318.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  11. XM_045051373.1 → XP_044907308.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

  12. XM_045051385.1 → XP_044907320.1  scm-like with four MBT domains protein 1 isoform X1

    Conserved Domains (2) summary
    cd09581
    Location:784 → 868
    SAM_Scm-like-4MBT1,2; SAM domain of Scm-like-4MBT1,2 proteins of Polycomb group
    smart00561
    Location:23 → 120
    MBT; Present in Drosophila Scm, l(3)mbt, and vertebrate SCML2

RNA

  1. XR_006593361.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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