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GNGT1 G protein subunit gamma transducin 1 [ Pteropus alecto (black flying fox) ]

Gene ID: 102898674, updated on 30-Mar-2024

Summary

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Gene symbol
GNGT1
Gene description
G protein subunit gamma transducin 1
Locus tag
PAL_GLEAN10021738
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See GNGT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006436282.1 (1737837..1755501)

NW_006436282.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene tissue factor pathway inhibitor 2 Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene G protein subunit gamma 11

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006436282 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G-protein beta-subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of heterotrimeric G-protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
guanine nucleotide-binding protein G(T) subunit gamma-T1
Names
Guanine nucleotide-binding protein G(T) subunit gamma-T1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006436282.1 Reference ASM32557v1 Primary Assembly

    Range
    1737837..1755501
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006911907.2 → XP_006911969.1  guanine nucleotide-binding protein G(T) subunit gamma-T1

    See identical proteins and their annotated locations for XP_006911969.1

    UniProtKB/TrEMBL
    L5KMI1
    Conserved Domains (1) summary
    smart00224
    Location:12 → 74
    GGL; G protein gamma subunit-like motifs
Nucleotide Protein
Heading Accession and Version

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