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TXNIP thioredoxin interacting protein [ Pteropus alecto (black flying fox) ]

Gene ID: 102897851, updated on 30-Mar-2024

Summary

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Gene symbol
TXNIP
Gene description
thioredoxin interacting protein
Locus tag
PAL_GLEAN10017508
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See TXNIP in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006442103.1 (18091485..18095019, complement)

NW_006442103.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 34A Neighboring gene RNA polymerase III subunit GL Neighboring gene ferritin light chain pseudogene Neighboring gene hemojuvelin BMP co-receptor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006442103 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
thioredoxin-interacting protein
Names
Thioredoxin-interacting protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006442103.1 Reference ASM32557v1 Primary Assembly

    Range
    18091485..18095019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006919714.3 → XP_006919776.1  thioredoxin-interacting protein

    See identical proteins and their annotated locations for XP_006919776.1

    UniProtKB/TrEMBL
    L5K2T1
    Conserved Domains (2) summary
    pfam02752
    Location:174 → 297
    Arrestin_C; Arrestin (or S-antigen), C-terminal domain
    cl22903
    Location:10 → 152
    Arrestin_N; Arrestin (or S-antigen), N-terminal domain
Nucleotide Protein
Heading Accession and Version

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