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CNTN2 contactin 2 [ Pteropus alecto (black flying fox) ]

Gene ID: 102896056, updated on 30-Mar-2024

Summary

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Gene symbol
CNTN2
Gene description
contactin 2
Locus tag
PAL_GLEAN10006958
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See CNTN2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006443119.1 (1649998..1669360, complement)

NW_006443119.1Genomic Context describing neighboring genes Neighboring gene RB binding protein 5, histone lysine methyltransferase complex subunit Neighboring gene transmembrane protein 81 Neighboring gene neurofascin Neighboring gene up-regulated during skeletal muscle growth protein 5 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006443119 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
contactin-2
Names
Contactin-2
contactin 2 (axonal)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006443119.1 Reference ASM32557v1 Primary Assembly

    Range
    1649998..1669360 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006922864.1 → XP_006922926.1  contactin-2

    UniProtKB/TrEMBL
    L5JXU1
    Conserved Domains (8) summary
    cd04969
    Location:432 → 504
    Ig5_Contactin_like; Fifth Ig domain of contactin
    cd05727
    Location:130 → 227
    Ig2_Contactin-2-like; Second Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05728
    Location:327 → 411
    Ig4_Contactin-2-like; Fourth Ig domain of the neural cell adhesion molecule contactin-2 and similar proteins
    cd05850
    Location:35 → 128
    Ig1_Contactin-2; First Ig domain of contactin-2
    smart00410
    Location:245 → 322
    IG_like; Immunoglobulin like
    cd00063
    Location:814 → 906
    FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
    pfam07679
    Location:326 → 411
    I-set; Immunoglobulin I-set domain
    cl11960
    Location:523 → 602
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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