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CLEC14A C-type lectin domain containing 14A [ Pteropus alecto (black flying fox) ]

Gene ID: 102894999, updated on 30-Mar-2024

Summary

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Gene symbol
CLEC14A
Gene description
C-type lectin domain containing 14A
Locus tag
PAL_GLEAN10008473
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See CLEC14A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006436664.1 (3248865..3250298)

NW_006436664.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 258 pseudogene Neighboring gene 5'-AMP-activated protein kinase subunit gamma-2 pseudogene Neighboring gene somatostatin receptor 1 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006436664 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 14 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006436664.1 Reference ASM32557v1 Primary Assembly

    Range
    3248865..3250298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006913486.1 → XP_006913548.1  C-type lectin domain family 14 member A

    See identical proteins and their annotated locations for XP_006913548.1

    UniProtKB/TrEMBL
    L5KKK6
    Conserved Domains (3) summary
    pfam07010
    Location:300 → 457
    Endomucin; Endomucin
    pfam14670
    Location:255 → 287
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl02432
    Location:32 → 175
    CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
Nucleotide Protein
Heading Accession and Version

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