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B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Pteropus alecto (black flying fox) ]

Gene ID: 102892817, updated on 2-May-2024

Summary

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Gene symbol
B3GNT5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See B3GNT5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006494611.1 (2124569..2139621)

NW_006494611.1Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene methylcrotonyl-CoA carboxylase subunit 1 Neighboring gene lysosomal associated membrane protein 3 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene zinc finger protein 396-like Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006494611 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in brain development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006494611.1 Reference ASM32557v1 Primary Assembly

    Range
    2124569..2139621
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006925762.2 → XP_006925824.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_006925824.1

    Conserved Domains (1) summary
    cl21608
    Location:100 → 297
    Galactosyl_T; Galactosyltransferase

  2. XM_006925760.2 → XP_006925822.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_006925822.1

    Conserved Domains (1) summary
    cl21608
    Location:100 → 297
    Galactosyl_T; Galactosyltransferase

  3. XM_006925763.2 → XP_006925825.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_006925825.1

    Conserved Domains (1) summary
    cl21608
    Location:100 → 297
    Galactosyl_T; Galactosyltransferase

  4. XM_006925761.1 → XP_006925823.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_006925823.1

    Conserved Domains (1) summary
    cl21608
    Location:100 → 297
    Galactosyl_T; Galactosyltransferase

  5. XM_006925764.1 → XP_006925826.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_006925826.1

    Conserved Domains (1) summary
    cl21608
    Location:100 → 297
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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