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BEND6 BEN domain containing 6 [ Pteropus alecto (black flying fox) ]

Gene ID: 102892238, updated on 30-Mar-2024

Summary

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Gene symbol
BEND6
Gene description
BEN domain containing 6
Locus tag
PAL_GLEAN10025295
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See BEND6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006494614.1 (30184603..30231286, complement)

NW_006494614.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 451 Neighboring gene 5S ribosomal RNA Neighboring gene KIAA1586 ortholog Neighboring gene 60S ribosomal protein L34 pseudogene Neighboring gene dystonin Neighboring gene nucleophosmin pseudogene Neighboring gene uncharacterized LOC112474569

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006494614 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of neuron differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BEN domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006494614.1 Reference ASM32557v1 Primary Assembly

    Range
    30184603..30231286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015600329.2 → XP_015455815.1  BEN domain-containing protein 6

    UniProtKB/TrEMBL
    L5JLB3
    Conserved Domains (1) summary
    smart01025
    Location:190 → 271
    BEN; The BEN domain is found in diverse animal proteins
Nucleotide Protein
Heading Accession and Version

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