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TMED1 transmembrane p24 trafficking protein 1 [ Pteropus alecto (black flying fox) ]

Gene ID: 102891664, updated on 30-Mar-2024

Summary

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Gene symbol
TMED1
Gene description
transmembrane p24 trafficking protein 1
Locus tag
PAL_GLEAN10002409
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See TMED1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006431558.1 (604239..614176)

NW_006431558.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C19orf38 homolog Neighboring gene 5S ribosomal RNA Neighboring gene dynamin 2 Neighboring gene 60S ribosomal protein L7 pseudogene Neighboring gene queuine tRNA-ribosyltransferase catalytic subunit 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006431558 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 1
Names
Transmembrane emp24 domain-containing protein 1
transmembrane emp24 protein transport domain containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006431558.1 Reference ASM32557v1 Primary Assembly

    Range
    604239..614176
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025040129.1 → XP_024895897.1  transmembrane emp24 domain-containing protein 1 isoform X1

    Conserved Domains (1) summary
    pfam01105
    Location:33 → 197
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  2. XM_025040134.1 → XP_024895902.1  transmembrane emp24 domain-containing protein 1 isoform X2

    Conserved Domains (1) summary
    pfam01105
    Location:33 → 197
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  3. XM_025040140.1 → XP_024895908.1  transmembrane emp24 domain-containing protein 1 isoform X3

    Conserved Domains (1) summary
    pfam01105
    Location:33 → 197
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  4. XM_006905867.3 → XP_006905929.1  transmembrane emp24 domain-containing protein 1 isoform X4

    See identical proteins and their annotated locations for XP_006905929.1

    UniProtKB/TrEMBL
    L5L3I9
    Conserved Domains (1) summary
    pfam01105
    Location:33 → 220
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

RNA

  1. XR_439082.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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