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UBR7 ubiquitin protein ligase E3 component n-recognin 7 [ Pteropus alecto (black flying fox) ]

Gene ID: 102890545, updated on 30-Mar-2024

Summary

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Gene symbol
UBR7
Gene description
ubiquitin protein ligase E3 component n-recognin 7
Locus tag
PAL_GLEAN10020791
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See UBR7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006494609.1 (16300546..16316546)

NW_006494609.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 60S ribosomal protein L30-like Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene GON7 subunit of KEOPS complex Neighboring gene BTB domain containing 7 Neighboring gene U6 spliceosomal RNA Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006494609 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative E3 ubiquitin-protein ligase UBR7
Names
Putative E3 ubiquitin-protein ligase UBR7
ubiquitin protein ligase E3 component n-recognin 7 (putative)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006494609.1 Reference ASM32557v1 Primary Assembly

    Range
    16300546..16316546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006925544.3 → XP_006925606.1  putative E3 ubiquitin-protein ligase UBR7 isoform X2

    See identical proteins and their annotated locations for XP_006925606.1

    UniProtKB/TrEMBL
    L5JSH7
    Conserved Domains (2) summary
    cd15542
    Location:134 → 185
    PHD_UBR7; PHD finger found in putative E3 ubiquitin-protein ligase UBR7
    pfam02207
    Location:46 → 113
    zf-UBR; Putative zinc finger in N-recognin (UBR box)

  2. XM_015599713.2 → XP_015455199.1  putative E3 ubiquitin-protein ligase UBR7 isoform X1

    Conserved Domains (2) summary
    cd15542
    Location:134 → 185
    PHD_UBR7; PHD finger found in putative E3 ubiquitin-protein ligase UBR7
    pfam02207
    Location:46 → 113
    zf-UBR; Putative zinc finger in N-recognin (UBR box)
Nucleotide Protein
Heading Accession and Version

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