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LCLAT1 lysocardiolipin acyltransferase 1 [ Pteropus alecto (black flying fox) ]

Gene ID: 102883639, updated on 30-Mar-2024

Summary

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Gene symbol
LCLAT1
Gene description
lysocardiolipin acyltransferase 1
Locus tag
PAL_GLEAN10020301
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See LCLAT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006434835.1 (18801116..18947700)

NW_006434835.1Genomic Context describing neighboring genes Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene glycine cleavage system H protein, mitochondrial-like Neighboring gene 5S ribosomal RNA Neighboring gene 5S ribosomal RNA Neighboring gene calpain 13 Neighboring gene polypeptide N-acetylgalactosaminyltransferase 14

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006434835 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysocardiolipin acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006434835.1 Reference ASM32557v1 Primary Assembly

    Range
    18801116..18947700
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025045698.1 → XP_024901466.1  lysocardiolipin acyltransferase 1

    UniProtKB/TrEMBL
    L5KT26
    Conserved Domains (2) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:234 → 299
    Acyltransf_C; Acyltransferase C-terminus

  2. XM_025045699.1 → XP_024901467.1  lysocardiolipin acyltransferase 1

    UniProtKB/TrEMBL
    L5KT26
    Conserved Domains (2) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:234 → 299
    Acyltransf_C; Acyltransferase C-terminus

  3. XM_025045697.1 → XP_024901465.1  lysocardiolipin acyltransferase 1

    UniProtKB/TrEMBL
    L5KT26
    Conserved Domains (2) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:234 → 299
    Acyltransf_C; Acyltransferase C-terminus

  4. XM_025045696.1 → XP_024901464.1  lysocardiolipin acyltransferase 1

    UniProtKB/TrEMBL
    L5KT26
    Conserved Domains (2) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:234 → 299
    Acyltransf_C; Acyltransferase C-terminus

  5. XM_025045700.1 → XP_024901468.1  lysocardiolipin acyltransferase 1

    UniProtKB/TrEMBL
    L5KT26
    Conserved Domains (2) summary
    cd07990
    Location:55 → 248
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:234 → 299
    Acyltransf_C; Acyltransferase C-terminus
Nucleotide Protein
Heading Accession and Version

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