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SASS6 SAS-6 centriolar assembly protein [ Pteropus alecto (black flying fox) ]

Gene ID: 102881312, updated on 30-Mar-2024

Summary

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Gene symbol
SASS6
Gene description
SAS-6 centriolar assembly protein
Locus tag
PAL_GLEAN10017305
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See SASS6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006442103.1 (4913230..4949696, complement)

NW_006442103.1Genomic Context describing neighboring genes Neighboring gene amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase Neighboring gene 40S ribosomal protein S26-like Neighboring gene solute carrier family 35 member A3 Neighboring gene major facilitator superfamily domain containing 14A Neighboring gene mitochondrial intermembrane space import and assembly protein 40 pseudogene Neighboring gene tRNA methyltransferase 13 homolog Neighboring gene uncharacterized LOC107196242 Neighboring gene leucine rich repeat containing 39

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006442103 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
spindle assembly abnormal protein 6 homolog
Names
Spindle assembly abnormal protein 6 like protein
spindle assembly 6 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006442103.1 Reference ASM32557v1 Primary Assembly

    Range
    4913230..4949696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006919559.3 → XP_006919621.2  spindle assembly abnormal protein 6 homolog isoform X4

    UniProtKB/TrEMBL
    L5K295
    Conserved Domains (4) summary
    cd00187
    Location:434 → 554
    TOP4c; DNA Topoisomerase, subtype IIA; domain A'; bacterial DNA topoisomerase IV (C subunit, ParC), bacterial DNA gyrases (A subunit, GyrA),mammalian DNA toposiomerases II. DNA topoisomerases are essential enzymes that regulate the conformational changes in DNA ...
    pfam15619
    Location:311 → 471
    Lebercilin; Ciliary protein causing Leber congenital amaurosis disease
    pfam16531
    Location:120 → 214
    SAS-6_N; Centriolar protein SAS N-terminal
    cl02488
    Location:318 → 534
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...

  2. XM_025052295.1 → XP_024908063.1  spindle assembly abnormal protein 6 homolog isoform X3

    UniProtKB/TrEMBL
    L5K295
    Conserved Domains (2) summary
    pfam16531
    Location:120 → 215
    SAS-6_N; Centriolar protein SAS N-terminal
    cl25732
    Location:239 → 540
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_025052293.1 → XP_024908061.1  spindle assembly abnormal protein 6 homolog isoform X1

    UniProtKB/TrEMBL
    L5K295
    Conserved Domains (2) summary
    pfam16531
    Location:46 → 141
    SAS-6_N; Centriolar protein SAS N-terminal
    cl25732
    Location:271 → 505
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_025052294.1 → XP_024908062.1  spindle assembly abnormal protein 6 homolog isoform X2

    UniProtKB/TrEMBL
    L5K295
    Conserved Domains (2) summary
    pfam16531
    Location:46 → 141
    SAS-6_N; Centriolar protein SAS N-terminal
    cl25732
    Location:271 → 505
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_025052296.1 → XP_024908064.1  spindle assembly abnormal protein 6 homolog isoform X5

    Conserved Domains (2) summary
    pfam16531
    Location:46 → 141
    SAS-6_N; Centriolar protein SAS N-terminal
    cl25732
    Location:271 → 505
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
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