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COG6 component of oligomeric golgi complex 6 [ Pteropus alecto (black flying fox) ]

Gene ID: 102877905, updated on 30-Mar-2024

Summary

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Gene symbol
COG6
Gene description
component of oligomeric golgi complex 6
Locus tag
PAL_GLEAN10015309
Gene type
protein coding
RefSeq status
MODEL
Organism
Pteropus alecto
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yinpterochiroptera; Pteropodoidea; Pteropodidae; Pteropodinae; Pteropus
Orthologs
human mouse all
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Genomic context

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See COG6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
102 current ASM32557v1 (GCF_000325575.1) Unplaced Scaffold NW_006437828.1 (10600991..10649845)

NW_006437828.1Genomic Context describing neighboring genes Neighboring gene LHFPL tetraspan subfamily member 6 Neighboring gene uncharacterized LOC112482160 Neighboring gene uncharacterized LOC112482173 Neighboring gene ubiquitin carboxyl-terminal hydrolase 17-like protein 6 Neighboring gene beta-defensin 107A-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006437828 Unplaced Scaffold Reference ASM32557v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 6
Names
Conserved oligomeric Golgi complex subunit 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pteropus alecto Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32557v1 Primary Assembly

Genomic

  1. NW_006437828.1 Reference ASM32557v1 Primary Assembly

    Range
    10600991..10649845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006914965.3 → XP_006915027.1  LOW QUALITY PROTEIN: conserved oligomeric Golgi complex subunit 6

    UniProtKB/TrEMBL
    L5KEE9
    Conserved Domains (1) summary
    pfam06419
    Location:58 → 656
    COG6; Conserved oligomeric complex COG6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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