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WASHC2A WASH complex subunit 2A [ Chrysochloris asiatica (Cape golden mole) ]

Gene ID: 102841186, updated on 10-Mar-2024

Summary

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Gene symbol
WASHC2A
Gene description
WASH complex subunit 2A
Gene type
protein coding
RefSeq status
MODEL
Organism
Chrysochloris asiatica
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Chrysochloridae; Chrysochlorinae; Chrysochloris
Also known as
FAM21A
Orthologs
human all
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Genomic context

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See WASHC2A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
28
Annotation release Status Assembly Chr Location
100 current ChrAsi1.0 (GCF_000296735.1) Unplaced Scaffold NW_006408807.1 (130805..253361, complement)

NW_006408807.1Genomic Context describing neighboring genes Neighboring gene nuclear receptor coactivator 4 Neighboring gene translocase of inner mitochondrial membrane 23 homolog (yeast)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006408807 unplaced scaffold reference ChrAsi1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables retromer complex binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde transport, endosome to Golgi IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit FAM21A
Names
family with sequence similarity 21 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chrysochloris asiatica Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChrAsi1.0 Primary Assembly

Genomic

  1. NW_006408807.1 Reference ChrAsi1.0 Primary Assembly

    Range
    130805..253361 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006874613.1 → XP_006874675.1  WASH complex subunit FAM21A

    UniProtKB/TrEMBL
    A0A9B0U8K4
    Conserved Domains (1) summary
    pfam15255
    Location:856 → 970
    CAP-ZIP_m; WASH complex subunit CAP-Z interacting, central region
Nucleotide Protein
Heading Accession and Version

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