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GALNT1 polypeptide N-acetylgalactosaminyltransferase 1 [ Myotis davidii ]

Gene ID: 102775349, updated on 30-Mar-2024

Summary

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Gene symbol
GALNT1
Gene description
polypeptide N-acetylgalactosaminyltransferase 1
Locus tag
MDA_GLEAN10021374
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See GALNT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006292687.1 (7204130..7255750, complement)

NW_006292687.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown open reading frame, human C18orf21 Neighboring gene uncharacterized LOC107183479 Neighboring gene uncharacterized LOC102751517

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006292687.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 1
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 (GalNAc-T1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006292687.1 Reference ASM32734v1

    Range
    7204130..7255750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006766117.2 → XP_006766180.1  polypeptide N-acetylgalactosaminyltransferase 1 isoform X2

    See identical proteins and their annotated locations for XP_006766180.1

    UniProtKB/TrEMBL
    L5LR45
    Conserved Domains (2) summary
    cd02510
    Location:119 → 419
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:432 → 548
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_006766118.2 → XP_006766181.1  polypeptide N-acetylgalactosaminyltransferase 1 isoform X1

    See identical proteins and their annotated locations for XP_006766181.1

    UniProtKB/TrEMBL
    L5LR45
    Conserved Domains (2) summary
    cd02510
    Location:119 → 419
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:432 → 548
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_015565554.1 → XP_015421040.1  polypeptide N-acetylgalactosaminyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    L5LR45
    Conserved Domains (2) summary
    cd02510
    Location:59 → 359
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:372 → 488
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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