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ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 [ Myotis davidii ]

Gene ID: 102759471, updated on 30-Mar-2024

Summary

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Gene symbol
ST3GAL5
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 5
Locus tag
MDA_GLEAN10011854
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See ST3GAL5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006290778.1 (983861..1027097)

NW_006290778.1Genomic Context describing neighboring genes Neighboring gene pentatricopeptide repeat domain 3 Neighboring gene RNA polymerase I subunit A Neighboring gene 40S ribosomal protein S6 pseudogene Neighboring gene atonal bHLH transcription factor 8

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006290778.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lactosylceramide alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide alpha-2,3-sialyltransferase
Names
Lactosylceramide alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006290778.1 Reference ASM32734v1

    Range
    983861..1027097
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015564086.1 → XP_015419572.1  lactosylceramide alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:163 → 431
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_006763990.2 → XP_006764053.1  lactosylceramide alpha-2,3-sialyltransferase isoform X5

    See identical proteins and their annotated locations for XP_006764053.1

    UniProtKB/TrEMBL
    L5LVD2
    Conserved Domains (1) summary
    pfam00777
    Location:114 → 382
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  3. XM_015564089.1 → XP_015419575.1  lactosylceramide alpha-2,3-sialyltransferase isoform X4

    Conserved Domains (1) summary
    pfam00777
    Location:133 → 401
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_015564087.1 → XP_015419573.1  lactosylceramide alpha-2,3-sialyltransferase isoform X2

    Conserved Domains (1) summary
    pfam00777
    Location:148 → 416
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  5. XM_015564090.1 → XP_015419576.1  lactosylceramide alpha-2,3-sialyltransferase isoform X5

    UniProtKB/TrEMBL
    L5LVD2
    Conserved Domains (1) summary
    pfam00777
    Location:114 → 382
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_015564088.1 → XP_015419574.1  lactosylceramide alpha-2,3-sialyltransferase isoform X3

    Conserved Domains (1) summary
    pfam00777
    Location:146 → 414
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

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