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SDC2 syndecan 2 [ Myotis davidii ]

Gene ID: 102755591, updated on 30-Mar-2024

Summary

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Gene symbol
SDC2
Gene description
syndecan 2
Locus tag
MDA_GLEAN10013290
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Also known as
Syndecan-2
Orthologs
human mouse all
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Genomic context

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See SDC2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006282748.1 (1300772..1310958, complement)

NW_006282748.1Genomic Context describing neighboring genes Neighboring gene 60S acidic ribosomal protein P2 Neighboring gene uncharacterized LOC107182374 Neighboring gene uncharacterized LOC107182377 Neighboring gene phosphatidylserine synthase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006282748.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dendrite morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syndecan-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006282748.1 Reference ASM32734v1

    Range
    1300772..1310958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006753184.2 → XP_006753247.1  syndecan-2

    See identical proteins and their annotated locations for XP_006753247.1

    UniProtKB/TrEMBL
    L5MHS1
    Conserved Domains (1) summary
    pfam01034
    Location:109 → 170
    Syndecan; Syndecan domain
Nucleotide Protein
Heading Accession and Version

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