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KERA keratocan [ Myotis davidii ]

Gene ID: 102754136, updated on 30-Mar-2024

Summary

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Gene symbol
KERA
Gene description
keratocan
Locus tag
MDA_GLEAN10011256
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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See KERA in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006287544.1 (1633959..1641011)

NW_006287544.1Genomic Context describing neighboring genes Neighboring gene decorin Neighboring gene lumican Neighboring gene epiphycan Neighboring gene coiled-coil glutamate rich protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006287544.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative analysis of bat genomes provides insight into the evolution of flight and immunity. Zhang G, et al. Science, 2013 Jan 25. PMID 23258410, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
keratocan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006287544.1 Reference ASM32734v1

    Range
    1633959..1641011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015561074.1 → XP_015416560.1  keratocan isoform X2

    UniProtKB/TrEMBL
    L5M5L9
    Conserved Domains (4) summary
    smart00013
    Location:41 → 75
    LRRNT; Leucine rich repeat N-terminal domain
    cd00116
    Location:141 → 333
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:73 → 96
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:142 → 204
    LRR_8; Leucine rich repeat

  2. XM_006759353.2 → XP_006759416.1  keratocan isoform X1

    Conserved Domains (4) summary
    smart00013
    Location:98 → 132
    LRRNT; Leucine rich repeat N-terminal domain
    cd00116
    Location:198 → 390
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
    sd00033
    Location:130 → 153
    LRR_RI; leucine-rich repeat [structural motif]
    pfam13855
    Location:199 → 261
    LRR_8; Leucine rich repeat
Nucleotide Protein
Heading Accession and Version

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