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SLC17A5 solute carrier family 17 member 5 [ Myotis davidii ]

Gene ID: 102751743, updated on 30-Mar-2024

Summary

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Gene symbol
SLC17A5
Gene description
solute carrier family 17 member 5
Locus tag
MDA_GLEAN10020523
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis davidii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Also known as
Sialin
Orthologs
human mouse all
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Genomic context

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See SLC17A5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current ASM32734v1 (GCF_000327345.1) Unplaced Scaffold NW_006296625.1 (1723528..1776382, complement)

NW_006296625.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107184427 Neighboring gene uncharacterized LOC107184426 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 Neighboring gene CD109 molecule Neighboring gene ferritin heavy chain pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006296625.1 Unplaced Scaffold Reference ASM32734v1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic anion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sialin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis davidii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM32734v1

Genomic

  1. NW_006296625.1 Reference ASM32734v1

    Range
    1723528..1776382 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015569427.1 → XP_015424913.1  sialin isoform X3

    UniProtKB/TrEMBL
    L5LC29
    Conserved Domains (2) summary
    cd06174
    Location:90 → 443
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    TIGR00894
    Location:23 → 457
    2A0114euk; Na(+)-dependent inorganic phosphate cotransporter

  2. XM_015569428.1 → XP_015424914.1  sialin isoform X4

    UniProtKB/TrEMBL
    L5LC29
    Conserved Domains (2) summary
    cd06174
    Location:93 → 440
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    TIGR00894
    Location:23 → 454
    2A0114euk; Na(+)-dependent inorganic phosphate cotransporter

  3. XM_015569426.1 → XP_015424912.1  sialin isoform X2

    Conserved Domains (1) summary
    cd06174
    Location:93 → 414
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

  4. XM_015569425.1 → XP_015424911.1  sialin isoform X1

    UniProtKB/TrEMBL
    L5LC29
    Conserved Domains (2) summary
    cd06174
    Location:93 → 469
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
    TIGR00894
    Location:23 → 483
    2A0114euk; Na(+)-dependent inorganic phosphate cotransporter
Nucleotide Protein
Heading Accession and Version

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