U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

COL9A2 collagen type IX alpha 2 chain [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102750929, updated on 10-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
COL9A2
Gene description
collagen type IX alpha 2 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See COL9A2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
32
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006383913.1 (689521..704579, complement)

NW_006383913.1Genomic Context describing neighboring genes Neighboring gene zinc metallopeptidase STE24 Neighboring gene 60S ribosomal protein L30-like Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC115942425 Neighboring gene small ArfGAP2 Neighboring gene ZFP69 zinc finger protein B

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006383913 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
collagen alpha-2(IX) chain

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006383913.1 Reference LepWed1.0 Primary Assembly

    Range
    689521..704579 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006737514.2 → XP_006737577.1  collagen alpha-2(IX) chain

    UniProtKB/TrEMBL
    A0A2U3Y1H4
    Conserved Domains (1) summary
    pfam01391
    Location:171 → 230
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.