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KPTN kaptin, actin binding protein [ Leptonychotes weddellii (Weddell seal) ]

Gene ID: 102745984, updated on 10-Mar-2024

Summary

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Gene symbol
KPTN
Gene description
kaptin, actin binding protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptonychotes weddellii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Leptonychotes
Orthologs
human mouse all
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Genomic context

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See KPTN in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
101 current LepWed1.0 (GCF_000349705.1) Unplaced Scaffold NW_006384093.1 (432373..438147)

NW_006384093.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 541 Neighboring gene NSF attachment protein alpha Neighboring gene solute carrier family 8 member A2 Neighboring gene Meis homeobox 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006384093 Unplaced Scaffold Reference LepWed1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptonychotes weddellii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference LepWed1.0 Primary Assembly

Genomic

  1. NW_006384093.1 Reference LepWed1.0 Primary Assembly

    Range
    432373..438147
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006739434.2 → XP_006739497.1  KICSTOR complex protein kaptin isoform X1

    UniProtKB/TrEMBL
    A0A2U3Y6Y8
    Conserved Domains (1) summary
    pfam13517
    Location:316 → 383
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  2. XM_031034664.1 → XP_030890524.1  KICSTOR complex protein kaptin isoform X2

    UniProtKB/TrEMBL
    A0A7F8RBH2
    Conserved Domains (1) summary
    pfam13517
    Location:290 → 357
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella

  3. XM_031034665.1 → XP_030890525.1  KICSTOR complex protein kaptin isoform X3

    UniProtKB/TrEMBL
    A0A7F8RAU3
    Conserved Domains (1) summary
    pfam13517
    Location:266 → 333
    VCBS; Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella
Nucleotide Protein
Heading Accession and Version

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